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How to visualize nifti data?
+ easy to instal & to use
+ 4D data
+ can save a previous session data & setup
+ good to show multiple overlays on a structural MRI scan
+ selection of different Atlases in MNI (on the small atlas symbol in the Window with the coordinates)
+ easy setting of transparecy/colormaps of multiple overlays
- export only by taking screenshots
- only 3-slice view
+ can vizualize 4D data (time courses at every voxel)
+ can easy save png files to create movies from
- difficult to install (but instructions can be found here)
Matlab toolbox to plot slices in figures
+ can be included in Matlab code
+ can handle multiple overlays
+ GUI
Best way to use: create a slover object with the GUI, then modify the properties of the object in Matlab.
- not very well documented (but ask me [Daniela] if you have any questions)
+ very simple viewers with different pros and cons
+ super simple to use
+ gives very nice images in a surface-based visualization
+ can load all sorts of different data types (SPM, FSL, Freesurfer, Tracks, Nodes, ...)
+ includes scripting possibility from Matlab or Python
- Ce wiki
- Cette page